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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901408.1_cds_XP_016451412.1_45767
CDS Infomation

[gene=LOC107776103] [db_xref=GeneID:107776103] [protein=cellulose synthase-like protein E6] [protein_id=XP_016451412.1] [location=join(1743..2038,3070..3388,3691..3831,3917..4048,4222..4434,4571..4795,5033..5380,5528..6064)] [gbkey=CDS]
Sequence

ATGGGGAAAGATGGAAGTAGAAGAGAAGAAACTAATTTGAATCTTTCATTATTTGAGTCA
AAGGCAGCTAGAGGAAGAAATATTTACAAGTTATTTGCTTCAACAGTGTTTGTGGGTATT
TGCTTGATATGGATATACAGATTGATTAATATGCCAAGAAGAGGTGAATCTGGGAGATGG
GCATGGATAGGAATGTTCTTATCTGAGCTTGTCTTTGGTTTCTACTGGATTATCACTCAG
TCTGCTCGTTTGGATGTTATATATCGTTTTCCTTTCAAGAACAGACTCTCCCTCAGATAC
GAGGAGAAGTTGCCAGGTGTGGACATATTCGTTTGCACAGCAGATCCTATAATGGAGCCT
CCAACACTGGTGATTAACACAATATTGTCAGTGATGTCATATAATTATCCTCCACAAAAG
TTAAGTGTTTACCTTTCAGATGATGGGGGTTCAGAATATACGTTTTATGCTCTCCTTGAG
GTCTCTCAATTCTCAAAATATTGGATTCCTTTCTGCAAGAAATTCAATGTGGAGCCCAGG
TCTCCTGCTGCCTATTTTAAAGACTCATGCAGTTTAGACGATAAAGTTTTTGCTCAAGAA
TGGTTCAATACCAAGAAATTATATGAAGAGATGAAAACCAGGATTGAGGCCGCGATAAAA
AGTGGAAGCATCCCCAGTGAAATTAAGGCTCAGCACAAAGGGTTCTCGGAATGGAACTCA
AAAGTAACAAAGCATGATCATCACTCAATTGTTCAGATTCTAATAGATGGAAGGAACCAT
AACATGGCTGACGTGGATGGAAATCCACTGCCAACACTTGTCTATATGTCACGAGAGAAA
AAGCCAAAGTGGCCTCATAACTTCAAGGCCGGATCAATGAACTCATTGATACGAGTTTCG
TCACAAATAAGCAATGCGCCCATCATCCTTAACTTGGACTGCGACATGTACTCAAACGAT
CCAGATGCAATAAGAGAATCACTGTGCTTCTTCATGGACGAAAAGGAAGGGCACGAGATA
GCCTACGTTCAGTATCCTCAGCGTTATAATAATGCAACCAAAAATGACATTTATGGAAAT
GTGGCTCGAGTGACTCATGAGATTGAACTAGCTGGATTAGGAGGTTATGGAGCAGCTTTG
TATTGTGGCACAGGGTGTTTTCACAGAAGGGAAAGTCTCTGTGGCAGAAAAGTCTCTGAG
GACTATAGTGTTGAATGGAATAATAAGGGAGAAAAATGCACCTATAAAACTGTGGAAGAA
CTAGAGGAAGCATCAAAAGTTGTTGCAAACTGTAGCTATGAAGAGGGGACTCAATGGGGA
AAACAGATGGGGCTGATGTATGGGTGTCCTGTGGAAGATATAATCACAGGATTAACAATC
CAATGCAGAGGATGGAAATCAGTGTACTATAATCCCAGTAAACCTGCCTTTTTGGGTGTA
GCTCCAACAATCTTAGACGTTGCTCTTGTTCAGCATAAGAGGTGGTCAGAAGGCTTGTTC
CAAATTTTCATATCCAAATACTGCCCCTTCATATATGGCCATGGAAAAATCAAATTGGCT
GCCCAAATGGGATATTGTATTTACCTTCTCTGGGCTCCTGTTTCTGTTCCTACGCTGTTT
TATGTGTTGGTTCCTTCTCTATGTCTGCTTCATGGCGTCTCTCTATTCCCAGAGGTGTCA
AGCCTATGGTTCTTGCCTTTTGCATATGTGCTTTTCACCTTGAAGTTTGTGTATTCCTTG
GCTGAAGCCATGAGCTGCGGTGATACACCCAAGTCATGGTGGAACTTGCAAAGAATGTGG
ATGATTCGACGGACAACTGCGTACTTCTTCGCATTCATAGATTCAGTGATTAAGCAATTA
GGCCTCTCTCAGACAGCATTTGCGCTCACAACAAAGGTAGTAGACGACGATGTCCGGAGA
AGATACGAGCAAGAGATCATGGAGTTTGGCAGTTGTTCTGCCATGTTCACTATCACAGCA
ACACTTGCATTGGTTAACCTGATTAGTTTCATTTGGGGAATCAAGAAACTTGCATTAGAT
GGAGTGGTAAATACTGTGCCACAAGTTATTCTATGTGGATTAATAGTTCTAGTGAATGTC
CCAGTGTATGAAGCACTGTTTTTCCGCAGCGACAAGGGAAGCTTCTCGTCCTCTGTTTTG
GTACGATCTGTCGTCCTAGTATCAATAGCATATCTGCTACCTATTTTTTAG

Peptide Sequence

PEP ID

XP_016451412.1
PEP Infomation

PREDICTED: cellulose synthase-like protein E6 [Nicotiana tabacum]
Sequence

MGKDGSRREETNLNLSLFESKAARGRNIYKLFASTVFVGICLIWIYRLINMPRRGESGRW
AWIGMFLSELVFGFYWIITQSARLDVIYRFPFKNRLSLRYEEKLPGVDIFVCTADPIMEP
PTLVINTILSVMSYNYPPQKLSVYLSDDGGSEYTFYALLEVSQFSKYWIPFCKKFNVEPR
SPAAYFKDSCSLDDKVFAQEWFNTKKLYEEMKTRIEAAIKSGSIPSEIKAQHKGFSEWNS
KVTKHDHHSIVQILIDGRNHNMADVDGNPLPTLVYMSREKKPKWPHNFKAGSMNSLIRVS
SQISNAPIILNLDCDMYSNDPDAIRESLCFFMDEKEGHEIAYVQYPQRYNNATKNDIYGN
VARVTHEIELAGLGGYGAALYCGTGCFHRRESLCGRKVSEDYSVEWNNKGEKCTYKTVEE
LEEASKVVANCSYEEGTQWGKQMGLMYGCPVEDIITGLTIQCRGWKSVYYNPSKPAFLGV
APTILDVALVQHKRWSEGLFQIFISKYCPFIYGHGKIKLAAQMGYCIYLLWAPVSVPTLF
YVLVPSLCLLHGVSLFPEVSSLWFLPFAYVLFTLKFVYSLAEAMSCGDTPKSWWNLQRMW
MIRRTTAYFFAFIDSVIKQLGLSQTAFALTTKVVDDDVRRRYEQEIMEFGSCSAMFTITA
TLALVNLISFIWGIKKLALDGVVNTVPQVILCGLIVLVNVPVYEALFFRSDKGSFSSSVL
VRSVVLVSIAYLLPIF

Transcript Sequence

Gene sequence data has not been registered.